| Intein Name |
Ter DnaE-2 |
| Prototype Allele |
Ter DnaE-2 |
| Extein Name |
DnaE pol subunit, DNA polymerase III alpha subunit |
| Intein Class |
Theoretical |
| Organism Name |
Trichodesmium erythraeum IMS101 |
| Organism Description |
Cyanobacterium, taxon:203124 |
| Domain of Life |
Eubacteria |
| Endonuclease Activity |
|
| Endo Motif |
DOD |
| Location in Extein |
R2110 |
| Insert Site Comments |
dnaE-b |
| Intein Size (aa) |
428 |
| Intein N-terminal |
SLGEADLLRR/C |
| Intein C-terminal |
HN/CMGKKKVSEM |
| Accession No. |
ABG51145 in NCBI/protein, Tery_1889,Tery02003047 |
| Intein aa Sequence |
>GI:110166605 | ABG51145 || Ter DnaE-2 intein (including -1 and +1 extein residues)
RCLSGSTKVIDAATGNLFSLKEIAAQPEYWLSRKVFSLDLKSQQVVQQPITEIHPNGVRDVWQITTRTNRKVCATDDHLF
YTVLGWKPLKDFSVGDRLGLPNKIPINYRSQISDSKVKFTAYLIGEGYLYTNSFSCSYFCNSDGELIADFYGCAEELFGS
SAPIEKQLHLGNKSVIYVRIGLISGLKNWVDSYLQCANSRVQEIPNWIFSLSQSQLQLFLGILWSTSGIFDETIGYTYYS
SNSEVLVRQVQHLFLRLGIVSLFNVNKVKGQGELDVSYVVEVRGREDMLKFYKLIKPYLSSYKQGLCESCYLVIKYQQSY
QFKYFLTPDFFDLIVKAKKASSMTRALGVCGGEISSVWNFQNTSNRSLSFDKFNNFSTVLADEELTAIANSDVFWDEIIS
IEYIGKEEVFDLTIPETHNFIANDFIVHNC |
| Block A |
CLSGSTKVIDAAT 13 |
| Block B |
NRKVCATDDHLFYT 81 |
| Block C |
|
| Block D |
|
| Block E |
|
| Block H |
|
| Block F |
EVFDLTI**PETHNFI 420 |
| Block G |
NDFIVHNC 429 |
| Initially Contributed by |
Paul Liu |
| Contributor's Address |
|
| Contributor's Phone No. |
|
| Contributor's FAX No. |
|
| Contributor's Email address |
pxqliu@dal.ca |
| Independently Found By |
|
| Comments |
This Ter DnaE fragment has 2 inteins plus the N-terminal fragment of a split intein. Homolog of the catalytic alpha subunit of E. coli DNA polymerase III.
This sequence replaces the previous genome shotgun sequence submitted by Paul Liu to InBase from ZP_00075043.1 in NCBI/protein, Tery4385. This new sequence is identical to the previous sequence. |
| Date Submitted |
03/24/2004 |
| References |
Liu 2003
Caspi 2003 |
