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CV-NY2A RIR1 Intein
Intein Name CV-NY2A RIR1
Prototype Allele CIV RIR1
Extein Name Ribonucleoside- diphosphate reductase, alpha subunit
Intein Class Theoretical
Organism Name Chlorella virus NY2A infects Chlorella NC64A, which infects Paramecium bursaria
Organism Description dsDNA eucaryotic virus,taxon:46021, Family Phycodnaviridae
Domain of Life Eucarya
Endonuclease Activity
Endo Motif DOD
Location in Extein L436
Insert Site Comments RIR1-i
Intein Size (aa) 336
Intein N-terminal NAGTIRGSNL/C
Intein C-terminal GQ/CNEIVEYTSK
Accession No. 345824..349135 from DQ491002 in NCBI/genome
Intein aa Sequence >345824..349135 from DQ491002 in NCBI/genome | CV-NY2A RIR1 intein (including -1 and +1 extein residues)
LCVAGDTKILTSSGYHPIKDMEGKQVRVWNGYEFSETIVHKTGVNQKLIMVSLDDGTELRCTPYHKFYIETGSRPADKSR
VMEVRAGDLEKGDRIIRFELPTITVGETTMSDKEAYTKGFFSADGCVIKSKYGEDEYRISVKREDKIEALTKYVDVIKSH
TNRFRTHFYVPDYVQNKFEVPINSMVNEKISWLAGFMDGDGCVIRYKDIENMQAVSINKSFLQDIRLMLQTIGIHSTINK
FMPNRVMKMPDGRGGTDMYNGAESWRLQIDSEGVRKLFALGFTPRRLKMNGSRKRHHKTNKFTRVVSVTDHGDVEDTYCF
NEPKRHMGVFNGVITGQC
Block A CVAGDTKILTSSG 13
Block B GTELRCTPYHKFYI 68
Block C TKGFFSADG 124
Block D
Block E WLAGFMDGDG 200
Block H SINKSFLQDIRLMLQTIGI 233
Block F DTYCFN**EPKRHMGV 328
Block G GVITGGQC 337
Initially Contributed by Fran Perler
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Independently Found By
Comments Chlorella is a green plant that is a endosymbiont of Paramecium bursaria.
Date Submitted 10/23/2006
References Fitzgerald 2007

Last database update: 11/05/10

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